Tuesday, June 28, 2022

Cholera cases in Kathmandu - How to prevent yourself???

Preventive measures:
  1. Environmental sanitation
  2. Personal hygiene -regular hand washing
  3. Avoid unknown sources of drinking water and street foods
  4. Reasonable hygiene; use of disposable plates/glasses as much as possible for food serving, washing of food utensils with 0.5% hypochlorite water
  5. Proper sewage disposal
  6. Avoid raw vegetables
  7. Use boiled or chlorinated water for drinking



The Story of Cholera
(Short and very informative)


Thank to Global Health Media for producing such a wonderful and informative short animation.


 

Friday, June 10, 2022

Multidrug-resistant bacteria with ESBL genes: A growing threat among people living with HIV/AIDS in Nepal



Multidrug-resistant bacteria with ESBL genes: A growing threat among people living with HIV/AIDS in Nepal

Riju Maharjan1, Anup Bastola2, Nabaraj Adhikari1, Komal Raj Rijal1, Megha Raj Banjara1, Prakash Ghimire1 Upendra Thapa Shrestha1*

1 Central Department of Microbiology, Tribhuvan University, Kirtipur, Kathmandu, Nepal

2 Sukraraj Tropical and Infectious Disease Hospital, Teku, Kathmandu, Nepal

 

*Corresponding author: Upendra Thapa Shrestha, Central Department of Microbiology, Tribhuvan University, Kathmandu, Nepal, Email: upendrats@gmail.com /  upendra.thapashrestha@cdmi.tu.edu.np

 

ABSTRACT

Background: Bacterial opportunistic infections are common in people living with HIV/AIDS (PLHA). Besides HIV-TB co-infection, lower respiratory tract infections (LRTIs) due to multidrug-resistant (MDR) bacteria cause significant morbidity and mortality among PLHA. This study identified bacterial co-infection of the lower respiratory tract and detected plasmid-mediated blaTEM and blaCTX-M genes among Extended-Spectrum b-Lactamase (ESBL) producing isolates from sputum samples in PLHA.

Methods: A total of 263 PLHA with LRTIs were enrolled in this study, out of which, 50 were smokers, 70 had previous pulmonary tuberculosis, and 21 had CD4 count <200 cells/µl. Sputum samples collected from PLHA were processed with standard microbiological methods to identify the possible bacterial pathogens. The identified bacterial isolates were assessed for antibiotic susceptibility pattern using modified Kirby Bauer disk diffusion method following Clinical Laboratory Standard Institute (CLSI) guidelines. In addition, plasmid DNA was extracted from MDR and ESBL producers for screening of ESBL genes; blaCTX-M and blaTEM by conventional PCR method using specific primers.

Results: Of 263 sputum samples, 67 (25.48%) showed bacterial growth. Among different bacterial pathogens, Klebsiella pneumoniae, (17; 25.37%) was the most predominant, followed by Haemophillus influenzae, (14; 20.90%)  and  Escherichia coli, (12; 17.91%). A higher infection rate (4/8; 50%) was observed among people aged 61 -70 years, whereas no infection was observed below 20 years. About 30.0% (15/50) of smokers, 32.86% (23/70) cases with previous pulmonary tuberculosis, and 52.38% (11/21) with CD4 count <200 cells/µl had bacterial LRTIs. Among 53 bacterial isolates excluding H. influenzae, 28 isolates were MDR and 23 were ESBL producers. All ESBL producers were sensitive to colistin and polymyxin B. Among ESBL producers, 47.83% (11/23) possessed blaCTX-M, 8.6% (2/23) were positive for blaTEM gene, and 43.48% (10/23) possessed both ESBL genes.

Conclusion: The increasing rate of MDR bacterial infections, mainly ESBL producers of LRTIs causes difficulty in disease management, leading to high morbidity and mortality of PLHA. Hence, it is crucial to know the antibiogram pattern of the isolates to recommend effective antimicrobial therapy to treat LRTIs in PLHA.

 

Keywords: PLHA, Lower respiratory tract infection, ESBL, blaCTX-M, blaTEM

Citation: Maharjan et al. Multidrug-resistant bacteria with ESBL genes: A growing threat among people living with HIV/AIDS in Nepal. BMC Infectious Diseases (2022) 22:526
https://doi.org/10.1186/s12879-022-07503-2


Fulltext Article: Download

Friday, May 27, 2022

Can SMALLPOX be re-emerged again ?

 MONKEYPOX

 

 

Classification:

Group:             Group I (double-stranded DNA virus)

Family:             Poxviridae

Subfamily:       Chordopoxvirinae 

Genus:             Orthopoxvirus

Species:           More than ten species including smallpox, monkeypox, cowpox, horsepox,





etc.     

 

Virion Structure:

Virion: Complex structure, oval or brick-shaped, 400 nm in length x 230 nm in diameter; external surface shows ridges; contains the core and lateral bodies 

Composition: DNA (3%), protein (90%), lipid (5%) 

Genome: Double-stranded DNA, linear; size 130–375 kbp; has terminal loops; has low G + C content (30–40%) except for Parapoxvirus (63%) 

Proteins: Virions contain more than 100 polypeptides; many enzymes are present in the core, including the transcriptional system

Envelope: Virion assembly involves the formation of multiple membranes 

Replication: Cytoplasmic factories 

Outstanding characteristics: 

Largest and most complex viruses; very resistant to inactivation

Virus-encoded proteins help evade the host immune defense system

Member of same genus with Smallpox which was the first viral disease eradicated from the world and also with cowpox and horsepox

 

 

Outbreak:

On 14 May 2022, a familial cluster of two cases of monkeypox was reported in the United Kingdom (UK) by the UK Health Security Agency (UKHSA). These cases have no relation to a travel-related case from Nigeria that was previously reported on 7 May 2022 in the UK. Since the UKHSA reporting of cases, several other European countries have reported cases of monkeypox.

As of 19 May 2022, 38 cases have been confirmed worldwide. Of these, 26 cases have been confirmed in the following EU/EEA countries: Belgium (2), France (1), Italy (1), Portugal (14), Spain (7), and Sweden (1). In the UK, nine cases have been confirmed. In North America, three cases have been confirmed in Canada (2), and the US (1). The majority of cases have been in young men, many self-identifying as men who have sex with men (MSM), and none with recent travel history to areas where the disease is endemic. No deaths have been reported so far, and only two cases have been admitted to hospital for reasons other than isolation. 

 

Epidemiological update:

Since the disease was first detected on 7 May 2022 in the United Kingdom, a total of nine cases have been confirmed in the United Kingdom. Eight of the nine cases have no travel history and have no relation to the travel related case confirmed on 7 May.  

Since the UKHSA reporting of cases, in the EU/EEA, a further 26 cases have been confirmed since 18 May in Belgium (2), France (1), Italy (1), Portugal (14), Spain (7), and Sweden (1). Portugal has reported another 20 suspected cases, and Spain has reported another 23 suspected cases which are awaiting laboratory confirmation. 

In total, since 14 May, there have been 37 confirmed, non-travel related cases of monkeypox worldwide, with 26 in EU/EEA countries. The majority of cases are in young men, self-identifying as MSM. There have been no deaths, and two hospitalizations for reasons other than isolation were reported worldwide. Health authorities across counties have stated that further cases are expected. Below is a breakdown of the reporting countries: 

The majority of cases have been in young men, many self-identifying as men who have sex with men (MSM), and none with recent travel history to areas where the disease is endemic. Most cases presented with lesions on the genitalia or peri-genital area, indicating that transmission likely occurs during close physical contact during sexual activities. This is the first time that chains of transmission are reported in Europe without known epidemiological links to West or Central Africa, where this disease is endemic. These are also the first cases worldwide reported among MSM.

 

Disease background and transmission:

This is the first time that chains of transmission are reported in Europe without known epidemiological links to West or Central Africa. These are also the first cases worldwide reported among MSM. The monkeypox virus is considered to have moderate transmissibility among humans and can be transmitted through droplets and/or contact with infected lesions. Transmission between sexual partners, due to intimate contact during sex with infectious skin lesions seems the likely mode of transmission among MSM.  

Given the unusually high frequency of human-to-human transmission observed in this event, and the probable community transmission without history of traveling to endemic areas, the likelihood of further spread of the virus through close contact, for example during sexual activities, is considered to be high. The likelihood of transmission between individuals without close contact is considered to be low. 


The clinical manifestation of monkeypox is usually mild. The West African clade, which has so far been detected in the cases reported in Europe, has been observed to have a  case fatality rate of about 3.3% in Nigeria. Mortality is higher among children and young adults, and immunocompromised individuals are especially at risk of severe disease. Most people recover within weeks. 

 

Immediate recommendations:

Public health institutions/authorities and community-based organizations should take steps to raise awareness on the potential spread of monkeypox in the community, especially among men who have sex with other men that engage in casual sex, or who have multiple sexual partners.  Individuals engaging in casual sex or who have multiple sexual partners who are not MSM should also be vigilant. Any persons presenting with symptoms indicative of monkeypox should seek specialist care and should abstain from sexual activities or any other type of activities involving close contact until monkeypox is either excluded or the infection is resolved.

 
Suspected cases should be isolated and tested and notified promptly. Back-wards and forwards contact tracing should be initiated for positive cases, and exposed mammalian pets should be quarantined. If smallpox vaccines are available in the country, vaccination of high-risk close contacts should be considered after a risk-benefit assessment. For severe cases, treatment with a registered antiviral can be considered, if available in the country. 

 

ECDC actions : 

ECDC will continue to monitor this event through epidemic intelligence activities and report relevant news on an ad-hoc basis. ECDC published a news item on 19 May, with initial recommendations. An epidemiological update will be posted on 20 May. Multi-lateral meetings between affected countries, WHO IHR and ECDC have taken place to share information and coordinate response. A process in EpiPulse has been created to allow countries to share information with one another, WHO, and ECDC. The production of a Rapid Risk Assessment has been launched with prospective publication on Monday 23 May. 

 

Source:https://www.ecdc.europa.eu/en/news-events/epidemiological-update-monkeypox-outbreak

Bacteria in Photos

Bacteria in Photos